BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F12LP1|AL425743
(746 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1436 0.0
3x_Contig1585 190 2e-48
3x_Contig1560 173 6e-43
3x_Contig1805 133 5e-31
3x_Contig1790 133 5e-31
3x_Contig1802 117 3e-26
3x_Contig1803 113 5e-25
3x_Contig1701 111 2e-24
3x_Contig1796 107 3e-23
>3x_Contig1806
Length = 53694
Score = 1436 bits (724), Expect = 0.0
Identities = 742/746 (99%), Gaps = 2/746 (0%)
Strand = Plus / Plus
Query: 1 gtaattttggcgacctaaaaatatctttgttggacttgataatcatcaaatttggcagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41272 gtaattttggcgacctaaaaatatctttgttggacttgataatcatcaaatttggcagta 41331
Query: 61 gggactttgcttagagggttagtagtattcatgcagatggataccattttgagttgtagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41332 gggactttgcttagagggttagtagtattcatgcagatggataccattttgagttgtagt 41391
Query: 121 tgttaatgaaataaatggatggttcaattggtaatcggtatgcgaacttcgactagttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41392 tgttaatgaaataaatggatggttcaattggtaatcggtatgcgaacttcgactagttaa 41451
Query: 181 gtaaattacttacggtgttctccttggtttcttacatctgacatataagccaatgtagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41452 gtaaattacttacggtgttctccttggtttcttacatctgacatataagccaatgtagaa 41511
Query: 241 caataactaatatgtcgaatccaaatgggaaaactggatgaagaaacactctggctgtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41512 caataactaatatgtcgaatccaaatgggaaaactggatgaagaaacactctggctgtat 41571
Query: 301 actttttggattggtcttcgattcatcaaacgctgtagcctcgatcatagttgcactcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41572 actttttggattggtcttcgattcatcaaacgctgtagcctcgatcatagttgcactcaa 41631
Query: 361 cttcaacttcttatctagcattggttcaataactggcgccttagaaatgctcctacaacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41632 cttcaacttcttatctagcattggttcaataactggcgccttagaaatgctcctacaacg 41691
Query: 421 ccagagaacaacagcatattttgtcgctttgctttattcgtttaccaataatttttcact 480
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 41692 ccagagaacaacagcatattttgtc-cttt-ctttattcgtttaccaataatttttcact 41749
Query: 481 ttcggtgtgtctaagtgcattcatttcattagcatggatactatctaaaaaagacctgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41750 ttcggtgtgtctaagtgcattcatttcattagcatggatactatctaaaaaagacctgaa 41809
Query: 541 aaataaagcagaatatgatatcgatttggtttttttggaattaatgcataattctggtgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41810 aaataaagcagaatatgatatcgatttggtttttttggaattaatgcataattctggtgt 41869
Query: 601 gtatttcctgcagaacatgaaaagagaatctttttgattttccggcactgtatcacggct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41870 gtatttcctgcagaacatgaaaagagaatctttttgattttccggcactgtatcacggct 41929
Query: 661 gctgtaacgggtgcatttttaatattgagacttagaaaacatgtctaaaagttataaagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41930 gctgtaacgggtgcatttttaatattgagacttagaaaacatgtctaaaagttataaagg 41989
Query: 721 ttctcaaaatatgtgtgaagmtgtaa 746
|||||||||||||||| ||| |||||
Sbjct: 41990 ttctcaaaatatgtgtaaagctgtaa 42015
Score = 274 bits (138), Expect = 2e-73
Identities = 257/296 (86%), Gaps = 3/296 (1%)
Strand = Plus / Plus
Query: 27 ttgttggacttgataatcatcaaatttggcagtagggactttgcttagagggttagtagt 86
||||||||||||| ||| |||| |||| | |||||||||| ||||||| ||||||||||
Sbjct: 53344 ttgttggacttgacaattatcagatttcgtagtagggactcagcttagatggttagtagt 53403
Query: 87 attcatgcagatggataccattttgagttgtagttgttaatgaaataaatggatggttca 146
|||||| | | |||| ||||||||||||||||| | |||||||| | |||||||||||
Sbjct: 53404 attcataccaaaggatgccattttgagttgtagtggataatgaaactattggatggttca 53463
Query: 147 attggtaatcggtatgcgaacttcgactagttaagtaaattacttacggtgttctccttg 206
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 53464 attggtaatcggtatgcgaacttcgactagttaagtaaattacttacggtattccccttg 53523
Query: 207 gtttcttacatctgacatataagccaatgtagaacaataactaatat---gtcgaatcca 263
||||||| |||||||||||||| || |||||| ||||| |||||| |||| |||||
Sbjct: 53524 gtttcttctatctgacatataagttaacgtagaataataattaatatgtcgtcggatcca 53583
Query: 264 aatgggaaaactggatgaagaaacactctggctgtatactttttggattggtcttc 319
|||||||| | || | ||||||| | |||| |||||||||||||||||||| ||||
Sbjct: 53584 aatgggaagattgaacgaagaaaaattctgcctgtatactttttggattgggcttc 53639
>3x_Contig1585
Length = 11490
Score = 190 bits (96), Expect = 2e-48
Identities = 289/349 (82%), Gaps = 7/349 (2%)
Strand = Plus / Minus
Query: 73 agagggttagtagtattcatgcagatggataccattttgagttgtagttgttaatgaaat 132
||||||||||| ||||||||| ||||||||||||| || ||| |||| | ||||| |
Sbjct: 1735 agagggttagtggtattcatgtgaatggataccattt-gacttgaagtttatgatgaatt 1677
Query: 133 aaatggatggttcaattggtaatcggtatgcgaacttcgactagttaagtaaattactta 192
|| ||||| || ||||||| || ||||| | |||||||| | ||||||||||||||||
Sbjct: 1676 aa-tggataattaaattggtgatgggtatactaacttcgattgattaagtaaattactta 1618
Query: 193 cggtgttctccttggtttcttacatctgacatataagccaatgtagaacaataactaata 252
||||||||||||| ||||||| |||||||||| || ||||||||||||||| ||||
Sbjct: 1617 cggtgttctccttagtttcttctatctgacata--agttaatgtagaacaataattaatg 1560
Query: 253 tgt---cgaatccaaatgggaaaactggatgaagaaacactctggctgtatactttttgg 309
||| |||||||| ||||||||| ||||||||||||| ||| | |||||||||| |
Sbjct: 1559 tgtaaccgaatccagatgggaaaattggatgaagaaaccttctacttatatactttttag 1500
Query: 310 attggtcttcgattcatcaaacgctgtagcctcgatcatagttgcactcaacttcaactt 369
|||||| ||| | || ||||| ||||||||| |||| ||||| | |||| |||| |||
Sbjct: 1499 attggttttccaagcaccaaactctgtagccttgatcctagttcctctcagcttcggctt 1440
Query: 370 cttatctagcattggttcaataactggcgccttagaaatgctcctacaa 418
||||| |||||||||||| ||||||||||||||||||| || |||||||
Sbjct: 1439 cttatttagcattggttcgataactggcgccttagaaaagcacctacaa 1391
>3x_Contig1560
Length = 9209
Score = 173 bits (87), Expect = 6e-43
Identities = 194/229 (84%), Gaps = 3/229 (1%)
Strand = Plus / Plus
Query: 127 tgaaataaatggatggttcaattggtaatcggtatgcgaacttcgactagttaagtaaat 186
|||||||| ||||| ||| ||||||| |||| || | ||||||||||| ||||||||||
Sbjct: 2173 tgaaataattggatagttaaattggtgctcggcatacaaacttcgactaattaagtaaat 2232
Query: 187 tacttacggtgttctccttggtttcttacatctgacatataagccaatgtagaacaataa 246
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 2233 tacttacggtgttctccttggtttcttacatctgacatataacttaatgtagaacaaata 2292
Query: 247 ctaatatgtcg---aatccaaatgggaaaactggatgaagaaacactctggctgtatact 303
|| ||||||| |||||| | ||||| | |||||||||||| ||| | | ||||||
Sbjct: 2293 ttagtatgtcgtcaaatccagaggggaagataggatgaagaaaccttctagttatatact 2352
Query: 304 ttttggattggtcttcgattcatcaaacgctgtagcctcgatcatagtt 352
|||| |||||| |||| | ||||||||||||||||||| |||| |||||
Sbjct: 2353 ttttagattgggcttccaatcatcaaacgctgtagccttgatcctagtt 2401
>3x_Contig1805
Length = 19369
Score = 133 bits (67), Expect = 5e-31
Identities = 118/135 (87%)
Strand = Plus / Plus
Query: 299 atactttttggattggtcttcgattcatcaaacgctgtagcctcgatcatagttgcactc 358
|||||||| |||||| |||| | ||| |||| |||||||||| |||| ||||| |||
Sbjct: 44 atacttttcagattgggcttccaatcaccaaaagctgtagccttgatcctagttcgtctc 103
Query: 359 aacttcaacttcttatctagcattggttcaataactggcgccttagaaatgctcctacaa 418
| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 104 agcttcagattcttatctagcattggttcaataactggcgccttagaagtgctcctacaa 163
Query: 419 cgccagagaacaaca 433
|||||| ||||||||
Sbjct: 164 cgccagggaacaaca 178
>3x_Contig1790
Length = 27369
Score = 133 bits (67), Expect = 5e-31
Identities = 214/260 (82%), Gaps = 11/260 (4%)
Strand = Plus / Minus
Query: 169 tcgactagttaagtaaattacttacggtgttctccttggtttcttacatctgacatataa 228
||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| ||
Sbjct: 5181 tcgactaattaagtaaattacttacggtgctctccttg-tttcttacatctgacatacaa 5123
Query: 229 gccaatgtagaacaataactaatatg---tcgaatccaaatgggaaaactggatgaagaa 285
| ||||||||||||||| ||||||| || |||||| |||| |||| |||||||||||
Sbjct: 5122 gttaatgtagaacaataattaatatgtcatcaaatccagatggaaaaattggatgaagaa 5063
Query: 286 acactctggctgtatactttttggattggtcttcgattcatcaaacgctgtagcct---- 341
|| ||| | ||||||||| |||||| ||| | ||| ||||| |||||||||
Sbjct: 5062 accatctacttatatacttttcagattgggctttcaatcaccaaacactgtagccttgat 5003
Query: 342 --cgatcatagttgcactcaacttcaacttcttatctagcattggttcaataactggcgc 399
|||| ||||||| |||| | |||||||||||| ||||| ||||||| ||| || |||
Sbjct: 5002 gctgatcctagttgctctcagc-tcaacttcttatttagcaatggttcactaaatgacgc 4944
Query: 400 cttagaaatgctcctacaac 419
||||||||| | ||||||||
Sbjct: 4943 cttagaaatacccctacaac 4924
>3x_Contig1802
Length = 45229
Score = 117 bits (59), Expect = 3e-26
Identities = 104/119 (87%)
Strand = Plus / Plus
Query: 139 atggttcaattggtaatcggtatgcgaacttcgactagttaagtaaattacttacggtgt 198
|||||| ||||||| || ||| | |||||||||||| |||||| |||| ||||||||||
Sbjct: 36005 atggttgaattggtgattggtgtatgaacttcgactaattaagttaatttcttacggtgt 36064
Query: 199 tctccttggtttcttacatctgacatataagccaatgtagaacaataactaatatgtcg 257
|||||| |||||||||||| ||||||||||| |||| |||||||||| ||||||||||
Sbjct: 36065 tctcctcggtttcttacatatgacatataagttaatgcagaacaataattaatatgtcg 36123
>3x_Contig1803
Length = 52241
Score = 113 bits (57), Expect = 5e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 361 cttcaacttcttatctagcattggttcaataactggcgccttagaaatgctcctacaacg 420
||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 51534 cttcagcttcttatttagcattggttcaataactggcgccttagaagtgctcctacaacg 51593
Query: 421 ccagagaacaaca 433
|||| ||||||||
Sbjct: 51594 ccagggaacaaca 51606
>3x_Contig1701
Length = 10926
Score = 111 bits (56), Expect = 2e-24
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 331 cgctgtagcctcgatcatagttgcactcaacttcaacttcttatctagcattggttcaat 390
||||||||||| |||| ||||| |||| ||||| |||||||| |||||||| ||||||
Sbjct: 5279 cgctgtagccttgatcctagttcgtctcagcttcagcttcttatttagcattgtttcaat 5338
Query: 391 aactggcgccttagaaatgctcctacaacgccagagaacaacag 434
|||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 5339 aactggcgccttagaactgctcctacaacgccaggtaacaacag 5382
>3x_Contig1796
Length = 24558
Score = 107 bits (54), Expect = 3e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 356 ctcaacttcaacttcttatctagcattggttcaataactggcgccttagaaatgctccta 415
|||| ||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 8719 ctcagcttcagcttcttatttagcattagttcaataattggcgccttagaaatgctccta 8778
Query: 416 caacgccagagaacaaca 433
||||||||| ||||||||
Sbjct: 8779 caacgccagggaacaaca 8796
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6488
Number of Sequences: 1807
Number of extensions: 6488
Number of successful extensions: 112
Number of sequences better than 1.0e-20: 9
length of query: 746
length of database: 10,358,551
effective HSP length: 16
effective length of query: 730
effective length of database: 10,329,639
effective search space: 7540636470
effective search space used: 7540636470
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)